der protein (Sebaldella termitidis) - STRING interaction network

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der

Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (440 aa)

Predicted Functional Partners:

cmk

0.971

rplA

0.906

gpsA

0.857

ACZ08035.1

0.797

ACZ07109.1

0.793

ACZ07110.1

0.793

rplU

0.764

rplS

0.761

rplT

0.743

rplO

0.730

Your Current Organism:

Sebaldella termitidis

NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACZ07109.1	ACZ07110.1	Sterm_0224	Sterm_0225	PFAM: protein of unknown function UPF0118; KEGG: msu:MS1958 PerM protein.	PFAM: protein of unknown function UPF0118; KEGG: mmw:Mmwyl1_2087 hypothetical protein.	0.789
ACZ07109.1	der	Sterm_0224	Sterm_0223	PFAM: protein of unknown function UPF0118; KEGG: msu:MS1958 PerM protein.	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.793
ACZ07110.1	ACZ07109.1	Sterm_0225	Sterm_0224	PFAM: protein of unknown function UPF0118; KEGG: mmw:Mmwyl1_2087 hypothetical protein.	PFAM: protein of unknown function UPF0118; KEGG: msu:MS1958 PerM protein.	0.789
ACZ07110.1	der	Sterm_0225	Sterm_0223	PFAM: protein of unknown function UPF0118; KEGG: mmw:Mmwyl1_2087 hypothetical protein.	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.793
ACZ08035.1	cmk	Sterm_1167	Sterm_2690	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: vsa:VSAL_I1987 ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.	TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: hap:HAPS_0461 cytidylate kinase.	0.737
ACZ08035.1	der	Sterm_1167	Sterm_0223	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: vsa:VSAL_I1987 ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.797
ACZ08035.1	rplT	Sterm_1167	Sterm_1163	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: vsa:VSAL_I1987 ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.454
ACZ08035.1	rplU	Sterm_1167	Sterm_2653	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: vsa:VSAL_I1987 ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.609
cmk	ACZ08035.1	Sterm_2690	Sterm_1167	TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: hap:HAPS_0461 cytidylate kinase.	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: vsa:VSAL_I1987 ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.	0.737
cmk	der	Sterm_2690	Sterm_0223	TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: hap:HAPS_0461 cytidylate kinase.	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.971
der	ACZ07109.1	Sterm_0223	Sterm_0224	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	PFAM: protein of unknown function UPF0118; KEGG: msu:MS1958 PerM protein.	0.793
der	ACZ07110.1	Sterm_0223	Sterm_0225	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	PFAM: protein of unknown function UPF0118; KEGG: mmw:Mmwyl1_2087 hypothetical protein.	0.793
der	ACZ08035.1	Sterm_0223	Sterm_1167	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: vsa:VSAL_I1987 ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.	0.797
der	cmk	Sterm_0223	Sterm_2690	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: hap:HAPS_0461 cytidylate kinase.	0.971
der	gpsA	Sterm_0223	Sterm_2000	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: dal:Dalk_0486 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.	0.857
der	rplA	Sterm_0223	Sterm_2952	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.906
der	rplO	Sterm_0223	Sterm_3976	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.730
der	rplS	Sterm_0223	Sterm_0302	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.761
der	rplT	Sterm_0223	Sterm_1163	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.743
der	rplU	Sterm_0223	Sterm_2653	Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.764

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