STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07122.1Hypothetical protein; KEGG: pzu:PHZ_c2471 lysophospholipase L1. (376 aa)    
Predicted Functional Partners:
ACZ07123.1
PFAM: type II and III secretion system protein; KEGG: eta:ETA_07920 general secretion pathway protein D; Belongs to the bacterial secretin family.
     
 0.709
ACZ07124.1
KEGG: hypothetical protein.
       0.709
ACZ07125.1
KEGG: hypothetical protein.
       0.709
ACZ07126.1
Hypothetical protein.
       0.709
ACZ07127.1
Hypothetical protein.
       0.709
ACZ07128.1
KEGG: cation channel family protein.
       0.709
ACZ07129.1
PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: geo:Geob_3081 peptidase A24A domain protein.
       0.709
ACZ07130.1
Hypothetical protein; KEGG: ftn:FTN_0415 type IV pili, pilus assembly protein.
       0.709
ACZ07121.1
TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: nam:NAMH_1710 bifunctional protein HldE.
       0.541
ACZ10617.1
PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3559 plant-inducible protein.
 
  
 0.513
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.