STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07242.1Hypothetical protein; KEGG: similar to hCG2031650; K01175. (346 aa)    
Predicted Functional Partners:
gatC
glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
 
 0.929
ACZ07241.1
KEGG: plu:plu2000 hypothetical protein.
 
     0.922
ACZ07240.1
PFAM: alanine racemase domain protein; KEGG: cko:CKO_04801 hypothetical protein.
 
     0.916
ACZ07239.1
PFAM: Phosphopentomutase domain protein; metalloenzyme domain protein; KEGG: cko:CKO_04800 putative mutase.
 
    0.911
gatB
glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
  
 
 0.902
ACZ07243.1
KEGG: ecq:ECED1_4035 conserved hypothetical protein; putative inner membrane protein.
 
     0.899
ACZ07244.1
KEGG: ssn:SSON_3509 hypothetical protein.
 
     0.887
ACZ07245.1
PFAM: aryldialkylphosphatase; KEGG: yen:YE1042 putative hydrolase.
 
     0.869
ACZ07246.1
PFAM: PRD domain protein; KEGG: ect:ECIAI39_3860 hypothetical protein.
 
     0.860
ACZ07247.1
KEGG: ppr:PBPRA2775 hypothetical protein.
 
     0.784
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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