STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07320.1KEGG: sde:Sde_3686 hypothetical protein. (159 aa)    
Predicted Functional Partners:
ACZ07319.1
SMART: Hedgehog/intein hint domain protein; KEGG: hch:HCH_02073 rhs family protein.
       0.762
ACZ07317.1
Hypothetical protein.
       0.751
ACZ07318.1
KEGG: hypothetical protein.
       0.751
ACZ07316.1
Hypothetical protein.
       0.715
ACZ07315.1
KEGG: hypothetical protein.
       0.691
ACZ07321.1
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: bac:BamMC406_5979 hypothetical protein.
       0.686
ACZ07314.1
Hypothetical protein; KEGG: GI24505 gene product from transcript GI24505- RA.
       0.677
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.