STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07347.1PFAM: secretion protein HlyD family protein; KEGG: shl:Shal_3506 secretion protein HlyD family protein. (379 aa)    
Predicted Functional Partners:
ACZ07345.1
Hypothetical protein.
       0.746
ACZ07346.1
Hypothetical protein.
       0.746
ACZ10137.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shl:Shal_3932 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.732
ACZ10892.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sat:SYN_00851 type I secretion outer membrane protein.
 
 
 0.715
ACZ08343.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sat:SYN_00851 type I secretion outer membrane protein.
 
 
 0.713
ACZ10138.1
PFAM: outer membrane efflux protein; KEGG: dde:Dde_3627 outer membrane efflux protein.
 
 
 0.645
ACZ10009.1
PFAM: protein of unknown function DUF214; KEGG: cla:Cla_1167 ABC transporter, permease protein.
  
  
 0.644
ACZ10893.1
PFAM: secretion protein HlyD family protein; KEGG: pag:PLES_25901 membrane fusion protein.
  
     0.637
ACZ08927.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: asu:Asuc_1346 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.636
ACZ08929.1
PFAM: protein of unknown function DUF214; KEGG: bba:Bd0709 macrolide ABC transporter ATP- binding protein.
 
  
 0.633
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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