STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07398.1KEGG: rle:RL4049 hypothetical protein. (276 aa)    
Predicted Functional Partners:
ACZ07399.1
PFAM: OsmC family protein; KEGG: pat:Patl_4022 OsmC-like protein.
  
  
 0.532
ACZ09910.1
Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: atc:AGR_C_2461 hypothetical protein.
  
  
 0.525
ACZ07397.1
KEGG: hch:HCH_04257 hypothetical protein.
       0.468
ACZ10359.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mes:Meso_3221 transcriptional regulator, MarR family.
  
 
 0.458
ACZ10072.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_4095 transcriptional regulator, AraC family.
 
  
 0.417
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.