STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07455.1PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cff:CFF8240_1760 TonB-dependent heme receptor. (664 aa)    
Predicted Functional Partners:
ACZ07456.1
PFAM: transport system permease protein; ABC-3 protein; KEGG: ccv:CCV52592_0650 hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.948
ACZ07453.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: cja:CJA_1779 MotA/TolQ/ExbB proton channel family domain protein.
 
  
 0.933
ACZ07454.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: slo:Shew_2475 biopolymer transport protein ExbD/TolR.
 
  
 0.896
ACZ08982.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: hac:Hac_1159 translation initiation factor IF- 2.
 
 
 0.892
ACZ07457.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cff:CFF8240_1762 ferrichrome transport ATP- binding protein FhuC.
 
  
 0.885
ACZ07458.1
PFAM: periplasmic binding protein; KEGG: ccv:CCV52592_0648 hemin-binding periplasmic protein HmuT.
 
  
 0.850
ACZ07928.1
TIGRFAM: conserved repeat domain protein; KEGG: vha:VIBHAR_05162 hypothetical protein.
 
 
 
 0.841
ACZ07460.1
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: cju:C8J_1514 hypothetical protein.
 
  
 0.763
ACZ07462.1
KEGG: cff:CFF8240_1764 flavodoxin family protein.
 
     0.743
ACZ07139.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bba:Bd1493 hypothetical protein.
  
   
 0.718
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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