STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07480.1PFAM: OstA family protein; KEGG: glo:Glov_1235 organic solvent tolerance protein. (1194 aa)    
Predicted Functional Partners:
ACZ09587.1
PFAM: OstA family protein; KEGG: conserved hypothetical protein.
  
 
 0.786
ACZ07139.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bba:Bd1493 hypothetical protein.
 
  
 0.740
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
       0.738
ACZ07048.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
   
 0.605
ACZ09586.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: apa:APP7_0341 putative ABC transporter ATP- binding protein.
 
  
 0.531
ACZ09202.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
   
 0.519
ACZ07479.1
TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pau:PA14_61480 uracil permease.
       0.511
ACZ09579.1
PFAM: permease YjgP/YjgQ family protein; KEGG: glo:Glov_2589 permease YjgP/YjgQ family protein.
 
  
 0.510
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
   
 0.491
ACZ09933.1
ADP-heptose:LPS heptosyltransferase-like protein; KEGG: asa:ASA_0099 ADP-heptose:LPS heptosyltransferase II.
 
   
 0.482
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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