STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kduI4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (276 aa)    
Predicted Functional Partners:
ACZ07541.1
TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypi:YpsIP31758_0935 2-deoxy-D-gluconate 3- dehydrogenase.
 
 
 0.990
ACZ07568.1
PFAM: glycosyl hydrolase family 88; KEGG: hypothetical protein.
 
   
 0.802
ACZ07572.1
PFAM: glycoside hydrolase family 28; KEGG: atc:AGR_L_3361 hypothetical protein; Belongs to the glycosyl hydrolase 28 family.
 
   
 0.798
ACZ10871.1
PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3559 plant-inducible protein.
 
   
 0.770
ACZ10617.1
PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3559 plant-inducible protein.
 
   
 0.713
ACZ10877.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mll1734 hypothetical protein.
 
   
 0.706
ACZ09155.1
KEGG: sun:SUN_1004 hypothetical protein.
   
    0.667
uxaC
PFAM: Glucuronate isomerase; KEGG: asu:Asuc_0145 glucuronate isomerase.
 
   
 0.601
ACZ07174.1
Phosphate uptake regulator, PhoU; PFAM: PhoU family protein; KEGG: dat:HRM2_02440 PhoU2.
   
    0.557
ACZ07187.1
TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: rbo:A1I_01370 signal peptidase I; Belongs to the peptidase S26 family.
   
  
 0.541
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.