STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
uxaCPFAM: Glucuronate isomerase; KEGG: asu:Asuc_0145 glucuronate isomerase. (467 aa)    
Predicted Functional Partners:
ACZ07573.1
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE3707 altronate oxidoreductase.
 
 
 0.979
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.953
ACZ07567.1
PFAM: glycoside hydrolase family 4; KEGG: pla:Plav_1937 glycoside hydrolase family protein.
    
  0.929
ACZ07563.1
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: asu:Asuc_0154 altronate dehydratase.
 
  
 0.900
ACZ09936.1
Nucleotide sugar dehydrogenase; KEGG: sfu:Sfum_3370 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
     
 0.810
ACZ10878.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hin:HI0048 D-mannonate oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.776
ACZ07564.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ecr:ECIAI1_1938 sugar-binding transport (ABC transporter) ATP-binding protein (CymD protein); Belongs to the ABC transporter superfamily.
     
 0.727
ACZ10890.1
PFAM: PfkB domain protein; KEGG: hsm:HSM_0286 ribokinase-like domain- containing protein.
 
   
 0.625
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.601
ACZ07572.1
PFAM: glycoside hydrolase family 28; KEGG: atc:AGR_L_3361 hypothetical protein; Belongs to the glycosyl hydrolase 28 family.
 
   
 0.575
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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