STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07568.1PFAM: glycosyl hydrolase family 88; KEGG: hypothetical protein. (362 aa)    
Predicted Functional Partners:
ACZ07572.1
PFAM: glycoside hydrolase family 28; KEGG: atc:AGR_L_3361 hypothetical protein; Belongs to the glycosyl hydrolase 28 family.
   
 0.983
ACZ07569.1
PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein.
 
  
 0.810
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.802
ACZ10877.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mll1734 hypothetical protein.
 
    0.772
ACZ07573.1
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE3707 altronate oxidoreductase.
 
  
 0.691
ACZ07571.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3353 lactose transport system (permease).
 
  
 0.583
ACZ10869.1
KEGG: rec:RHECIAT_PC0000493 hypothetical protein.
 
   
 0.578
ACZ07541.1
TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypi:YpsIP31758_0935 2-deoxy-D-gluconate 3- dehydrogenase.
 
   
 0.564
ACZ07570.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_0774 binding-protein-dependent transport systems inner membrane component.
 
   
 0.551
ACZ07563.1
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: asu:Asuc_0154 altronate dehydratase.
 
   
 0.535
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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