STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07592.1PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_C_3999 hypothetical protein. (289 aa)    
Predicted Functional Partners:
ACZ07591.1
PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b20971 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
       0.773
ACZ07590.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20970 putative sugar uptake ABC transporter permease protein.
       0.757
ACZ08208.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: fph:Fphi_1728 drug/metabolite transporter superfamily protein.
  
     0.564
ACZ07589.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20969 putative sugar uptake ABC transporter permease protein.
       0.561
ACZ07587.1
Beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: eum:ECUMN_3559 cryptic beta-D-galactosidase, alpha subunit.
     
 0.471
ACZ07588.1
KEGG: sme:SM_b20968 hypothetical protein.
       0.457
ACZ09322.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: dds:Ddes_0873 protein of unknown function DUF6 transmembrane.
  
     0.405
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.