STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07600.1TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 putative outer membrane autotransporter barrel domain protein. (1256 aa)    
Predicted Functional Partners:
ACZ07928.1
TIGRFAM: conserved repeat domain protein; KEGG: vha:VIBHAR_05162 hypothetical protein.
 
  
 0.802
ACZ07275.1
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cha:CHAB381_0246 membrane protein.
 
   
 0.784
ACZ10339.1
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cha:CHAB381_0246 membrane protein.
 
   
 0.781
ACZ10637.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
 
 
   0.761
ACZ09171.1
PFAM: protein of unknown function DUF448; KEGG: gur:Gura_1900 hypothetical protein.
 
     0.755
ACZ07929.1
KEGG: ppr:PBPRA1141 hypothetical protein.
 
   
 0.753
ACZ10417.1
KEGG: cff:CFF8240_0385 hypothetical protein.
  
     0.737
ACZ07138.1
PFAM: protein of unknown function DUF490; KEGG: rsq:Rsph17025_2622 hypothetical protein.
 
   
 0.729
ACZ09338.1
PFAM: protein of unknown function DUF896.
  
     0.719
ACZ08378.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: ecz:ECS88_1500 putative autotransported outer membrane protein involved in cell adhesion.
 
  
 0.711
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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