STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07651.1PFAM: transcriptional regulator PadR family protein; KEGG: scl:sce6005 transcriptional regulator. (184 aa)    
Predicted Functional Partners:
ACZ07652.1
Multimeric flavodoxin WrbA-like protein; KEGG: pca:Pcar_2612 iron-sulfur flavoprotein.
     
 0.770
ACZ07653.1
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pca:Pcar_2612 iron-sulfur flavoprotein.
       0.764
ACZ07649.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mlo:mlr4398 transcription regulator.
 
  
 0.633
ACZ07650.1
KEGG: bja:blr0750 hypothetical protein.
       0.526
ACZ07654.1
PFAM: protein of unknown function DUF1271; SMART: zinc finger CDGSH-type domain protein; KEGG: mlo:mlr4660 hypothetical protein.
       0.492
ACZ09975.1
TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: yen:YE0580 nicotinamide-nucleotide adenylyltransferase.
  
    0.415
ACZ07329.1
PFAM: pentapeptide repeat protein; KEGG: ecm:EcSMS35_4879 pentapeptide repeat protein.
 
   
 0.400
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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