STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07658.1Hypothetical protein; KEGG: lhk:LHK_00981 YlbF. (301 aa)    
Predicted Functional Partners:
ACZ07657.1
PFAM: protein of unknown function DUF1116; KEGG: seg:SG0542 hypothetical protein.
 
 
 0.962
ACZ07656.1
PFAM: FdrA family protein; KEGG: pmr:PMI2202 protein FdrA (multicopy suppressor of dominant negative FtsH mutants).
 
 
 0.952
ACZ07659.1
Carbamate kinase; KEGG: ecw:EcE24377A_3199 carbamate kinase; TIGRFAM: carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; Belongs to the carbamate kinase family.
 
   
 0.754
ACZ07661.1
PFAM: Amidohydrolase 3; amidohydrolase; KEGG: pen:PSEEN3598 amidohydrolase.
 
     0.662
ACZ07660.1
PFAM: Citrate transporter; KEGG: hiq:CGSHiGG_06350 C4-dicarboxylate transporter.
       0.605
ACZ08814.1
SMART: Ankyrin; KEGG: smd:Smed_3569 ankyrin.
 
    0.418
ACZ07655.1
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ppd:Ppro_2970 GntR family transcriptional regulator.
       0.403
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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