STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07779.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rlt:Rleg2_2220 ABC transporter related. (329 aa)    
Predicted Functional Partners:
ACZ07780.1
PFAM: protein of unknown function DUF990; KEGG: bmj:BMULJ_04950 ABC-2 type transport system permease protein.
 
  
 0.969
ACZ07781.1
PFAM: protein of unknown function DUF990; KEGG: bba:Bd3592 hypothetical protein.
 
  
 0.964
ACZ08375.1
KEGG: ses:SARI_01426 hypothetical protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase; CBS domain containing protein.
     
0.831
ACZ10895.1
PFAM: ABC-2 type transporter; KEGG: pfl:PFL_2797 ABC transporter, ATP-binding protein/permease protein, putative.
      0.660
ACZ08340.1
PFAM: ABC-2 type transporter; KEGG: pfl:PFL_2797 ABC transporter, ATP-binding protein/permease protein, putative.
      0.641
ACZ08399.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asa:ASA_0602 ABC-type glutamine/glutamate transporter, ATP-binding protein.
 
     
0.581
ACZ10896.1
PFAM: ABC-2 type transporter; KEGG: pag:PLES_25922 inner membrane permease protein.
      0.507
ACZ07319.1
SMART: Hedgehog/intein hint domain protein; KEGG: hch:HCH_02073 rhs family protein.
  
     0.477
ACZ09306.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccv:CCV52592_0494 glutamate/aspartate ABC transporter, ATP-binding protein.
 
     
0.466
argS
KEGG: hiq:CGSHiGG_10215 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase.
 
     0.439
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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