STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07825.1KEGG: vsa:VSAL_I0108 membrane protein. (237 aa)    
Predicted Functional Partners:
ACZ07826.1
KEGG: esa:ESA_00251 hypothetical protein.
 
     0.937
ACZ07823.1
KEGG: spe:Spro_4380 hypothetical protein.
 
     0.930
ACZ07827.1
PFAM: protein of unknown function DUF1341; KEGG: sed:SeD_A4160 2-dehydro-3- deoxyphosphogluconate aldolase.
 
     0.919
ACZ07547.1
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: vfi:VF_2507 dihydroorotase.
 
     0.801
ACZ07548.1
TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: L-seryl-tRNA selenium transferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: esa:ESA_00254 hypothetical protein.
 
     0.788
ACZ10700.1
TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: L-seryl-tRNA selenium transferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: esa:ESA_00254 hypothetical protein.
 
     0.788
ACZ07549.1
PFAM: protein of unknown function DUF1341; KEGG: cko:CKO_05127 hypothetical protein.
 
     0.786
ACZ10699.1
PFAM: protein of unknown function DUF1341; KEGG: cko:CKO_05127 hypothetical protein.
 
     0.786
ACZ07824.1
KEGG: vsa:VSAL_I0109 hypothetical protein.
       0.768
ACZ07822.1
Hypothetical protein.
       0.664
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.