STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08088.1KEGG: hypothetical protein. (277 aa)    
Predicted Functional Partners:
ACZ08085.1
PFAM: Sel1 domain protein repeat-containing protein; SMART: Tetratricopeptide domain protein; Sel1 domain protein repeat-containing protein; KEGG: hip:CGSHiEE_05405 Sel1 domain-containing protein.
       0.774
ACZ08086.1
Hypothetical protein.
       0.773
ACZ08087.1
KEGG: CAP-Gly domain containing protein; K04648 dynactin 1.
       0.773
ACZ08084.1
Hypothetical protein; KEGG: cco:CCC13826_1195 ribosomal protein L7/L12.
       0.520
ACZ08089.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cla:Cla_0919 AcrA/AcrE family efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.449
ACZ08090.1
KEGG: lpp:lpp0078 hypothetical protein.
       0.410
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.