STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08218.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
ACZ08830.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: gsu:GSU2787 LysR family transcriptional regulator.
  
     0.584
ACZ08217.1
Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: pmu:PM1471 hypothetical protein.
       0.563
ACZ10317.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: gsu:GSU2787 LysR family transcriptional regulator.
  
     0.550
ACZ10626.1
KEGG: ank:AnaeK_3353 hypothetical protein.
 
     0.550
ACZ08931.1
Hypothetical protein.
 
     0.518
ACZ09479.1
KEGG: smt:Smal_3964 hypothetical protein.
  
     0.473
ACZ08411.1
KEGG: swd:Swoo_1440 hypothetical protein.
  
     0.452
ACZ07209.1
Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: pub:SAR11_0423 hypothetical protein.
  
     0.438
ACZ08702.1
KEGG: sil:SPO0961 hypothetical protein.
 
     0.409
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.