STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08237.1PFAM: protein of unknown function UPF0027; KEGG: glo:Glov_0158 protein of unknown function UPF0027. (379 aa)    
Predicted Functional Partners:
ACZ08910.1
KEGG: pfo:Pfl01_1947 hypothetical protein.
 
    0.775
ACZ06970.1
KEGG: scl:sce4731 hypothetical protein.
 
    0.617
ACZ07988.1
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: dde:Dde_0152 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family.
   
 0.558
ACZ09108.1
KEGG: dal:Dalk_0746 hypothetical protein.
  
     0.547
ACZ08236.1
Hypothetical protein.
       0.510
kptA
Phosphotransferase KptA/Tpt1; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
   
 0.497
ACZ07611.1
PFAM: ADP-ribosylation/Crystallin J1; KEGG: abm:ABSDF0852 putative ADP- ribosylglycohydrolase.
 
    0.489
ACZ07632.1
TIGRFAM: peptide chain release factor H; PFAM: Class I peptide chain release factor; KEGG: sed:SeD_A0345 putative peptide chain release factor H.
 
  
 0.488
ACZ09475.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: sde:Sde_0275 SPFH domain-containing protein/band 7 family protein.
 
 
 0.481
ACZ09483.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: mlo:mlr1172 hypothetical protein.
 
 
 0.453
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.