STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08250.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
ACZ08251.1
PFAM: protein of unknown function DUF955; KEGG: vvu:VV1_0393 ribosomal protein L22.
     
 0.780
ACZ08252.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: wpi:WPa_1341 putative transcriptional regulator.
  
  
 0.749
ACZ09428.1
Hypothetical protein.
  
 
 0.711
ACZ07928.1
TIGRFAM: conserved repeat domain protein; KEGG: vha:VIBHAR_05162 hypothetical protein.
  
 
 0.657
ACZ09304.1
KEGG: leucine-rich repeat protein (LRRP).
  
 
 0.657
ACZ10869.1
KEGG: rec:RHECIAT_PC0000493 hypothetical protein.
  
 
 0.657
ACZ07048.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
 
 0.622
ACZ08249.1
PFAM: integrase family protein; KEGG: cha:CHAB381_1561 site-specific recombinase phage integrase family protein; Belongs to the 'phage' integrase family.
     
 0.540
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.485
ACZ08253.1
Hypothetical protein.
       0.479
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.