STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08290.1TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: abc:ACICU_01216 phage putative head morphogenesis protein, SPP1 gp7. (641 aa)    
Predicted Functional Partners:
ACZ08289.1
PFAM: portal protein SPP1; KEGG: abcA2; ABC transporter A family protein.
 
     0.952
ACZ08287.1
PFAM: Terminase small subunit; KEGG: bmj:BMULJ_01412 bacteriophage terminase small subunit.
 
     0.944
ACZ08288.1
TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; protein of unknown function DUF1545; KEGG: par:Psyc_1001 PBSX family phage terminase large subunit.
 
     0.942
ACZ08292.1
PFAM: minor structural GP20 protein; KEGG: hypothetical protein.
 
     0.892
ACZ08295.1
Hypothetical protein.
 
     0.881
ACZ08296.1
Hypothetical protein.
 
     0.881
ACZ08300.1
Hypothetical protein.
 
     0.873
ACZ08299.1
Hypothetical protein.
 
     0.870
ACZ08297.1
Hypothetical protein.
 
     0.868
ACZ08301.1
PFAM: XkdN-like protein.
 
     0.859
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.