STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08387.1PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ecv:APECO1_467 putative transient receptor potential locus. (264 aa)    
Predicted Functional Partners:
ACZ08386.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: esa:ESA_01606 hypothetical protein.
 
   
 0.949
ACZ08388.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ecg:E2348C_1507 predicted oxidoreductase, NADH-binding.
 
  
 0.918
ACZ08383.1
PFAM: extracellular solute-binding protein family 1; KEGG: ent:Ent638_2164 extracellular solute-binding protein.
 
  
 0.850
ACZ08389.1
PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: ses:SARI_01291 hypothetical protein.
 
  
 0.833
ACZ08384.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ecl:EcolC_2314 binding-protein-dependent transport systems inner membrane component.
 
  
 0.742
ACZ08385.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ecl:EcolC_2313 binding-protein-dependent transport systems inner membrane component.
 
  
 0.726
ACZ08382.1
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ecm:EcSMS35_1813 alpha amylase family protein.
 
   
 0.604
ACZ08390.1
TIGRFAM: beta-phosphoglucomutase; beta- phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: nmc:NMC1776 beta-phosphoglucomutase.
     
 0.555
ACZ10849.1
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: lpf:lpl1617 hypothetical protein.
  
  
 0.498
ACZ08347.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mlr1887 hypothetical protein.
  
     0.466
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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