STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08422.1PFAM: protein of unknown function DUF214; KEGG: gbm:Gbem_0837 lipoprotein releasing system, transmembrane protein, LolC/E family. (385 aa)    
Predicted Functional Partners:
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 0.993
ACZ08928.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_4199 putative macrolide efflux ABC transporter, ATP-binding protein.
 
 
 0.808
ACZ08831.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: glo:Glov_1037 ABC transporter related.
  
 
 0.779
ACZ10008.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bba:Bd0709 macrolide ABC transporter ATP- binding protein.
  
 
 0.779
ACZ08421.1
PFAM: Barstar (barnase inhibitor); KEGG: plu:plu4062 hypothetical protein.
       0.773
ACZ08430.1
Hypothetical protein; KEGG: CG12455 gene product from transcript CG12455- RA.
  
 
 0.697
ACZ08420.1
PFAM: guanine-specific ribonuclease N1 and T1; KEGG: spe:Spro_4389 guanine-specific ribonuclease N1 and T1.
       0.689
ACZ10924.1
PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: dal:Dalk_0933 ribosomal protein S1.
 
     0.659
ACZ08424.1
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: tmz:Tmz1t_0707 sigma 54 modulation protein/ribosomal protein S30EA.
       0.625
ACZ07599.1
PFAM: OmpA/MotB domain protein; KEGG: smt:Smal_0800 OmpA/MotB domain protein.
  
 
 0.594
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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