STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08430.1Hypothetical protein; KEGG: CG12455 gene product from transcript CG12455- RA. (170 aa)    
Predicted Functional Partners:
ACZ08431.1
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.808
ACZ08432.1
Putative PTS IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vha:VIBHAR_05188 PTS system fructose-specific IIABC component.
       0.789
ACZ10009.1
PFAM: protein of unknown function DUF214; KEGG: cla:Cla_1167 ABC transporter, permease protein.
  
 
 0.777
nrdR
ATP-cone domain protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
       0.771
ACZ08429.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
     
 0.749
ACZ08434.1
PFAM: protein of unknown function DUF368; KEGG: mmw:Mmwyl1_1306 hypothetical protein.
       0.744
ACZ08422.1
PFAM: protein of unknown function DUF214; KEGG: gbm:Gbem_0837 lipoprotein releasing system, transmembrane protein, LolC/E family.
  
 
 0.697
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
   
 
 0.631
ACZ08831.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: glo:Glov_1037 ABC transporter related.
   
 
 0.614
ACZ08928.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_4199 putative macrolide efflux ABC transporter, ATP-binding protein.
   
 
 0.614
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.