STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08488.1PFAM: protein of unknown function DUF107; KEGG: rec:RHECIAT_CH0003812 hypothetical protein. (143 aa)    
Predicted Functional Partners:
ACZ08489.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: sme:SMc04020 hypothetical protein.
 
 
 0.951
ACZ08490.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: cak:Caul_4419 band 7 protein.
 
 
 0.925
cobS
Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
  
    0.736
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.575
ACZ07138.1
PFAM: protein of unknown function DUF490; KEGG: rsq:Rsph17025_2622 hypothetical protein.
  
     0.548
ACZ09483.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: mlo:mlr1172 hypothetical protein.
 
 
 0.539
ACZ10637.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
 
     0.508
ACZ07534.1
PFAM: protein of unknown function DUF307; KEGG: vsa:VSAL_I1374 hypothetical protein.
  
    0.486
ACZ09039.1
Conserved hypothetical protein; KEGG: sml:Smlt3468 putative transmembrane protein.
   
  
 0.478
ACZ09475.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: sde:Sde_0275 SPFH domain-containing protein/band 7 family protein.
  
 
 0.470
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.