STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08490.1PFAM: band 7 protein; SMART: band 7 protein; KEGG: cak:Caul_4419 band 7 protein. (315 aa)    
Predicted Functional Partners:
ACZ08488.1
PFAM: protein of unknown function DUF107; KEGG: rec:RHECIAT_CH0003812 hypothetical protein.
 
 
 0.925
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.763
ACZ08489.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: sme:SMc04020 hypothetical protein.
 
    
0.614
ACZ09483.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: mlo:mlr1172 hypothetical protein.
  
     0.536
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
  
 
 0.524
ACZ09117.1
PFAM: peptidase M16 domain protein; KEGG: gsu:GSU0927 M16 family peptidase.
  
 0.501
ACZ09577.1
PFAM: peptidase M16 domain protein; KEGG: gsu:GSU1594 M16 family peptidase; Belongs to the peptidase M16 family.
  
 0.501
ACZ07497.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pca:Pcar_1604 NADP-reducing hydrogenase chain C.
   
 
 0.487
ACZ10434.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ppd:Ppro_3516 NADH dehydrogenase (quinone).
   
 
 0.487
ACZ10967.1
PFAM: 60 kDa inner membrane insertion protein; KEGG: pca:Pcar_3143 inner-membrane protein.
  
 
 0.466
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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