Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08497.1Hypothetical protein; KEGG: sed:SeD_A4402 putative periplasmic protein. (375 aa)    
Predicted Functional Partners:
ACZ08496.1
KEGG: efe:EFER_3895 hypothetical protein.
 
    0.956
ACZ08501.1
KEGG: mxa:MXAN_2889 radical SAM domain-containing protein.
 
  
 0.919
ACZ08498.1
KEGG: mxa:MXAN_2887 hypothetical protein.
 
  
 0.907
ACZ08500.1
KEGG: mxa:MXAN_2888 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB.
 
    0.887
ACZ08043.1
Hypothetical protein.
  
     0.725
ACZ08499.1
KEGG: sdn:Sden_1971 hypothetical protein.
 
     0.617
ACZ09978.1
PFAM: conserved hypothetical protein; KEGG: hypothetical protein.
  
     0.575
ACZ08495.1
PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: dal:Dalk_0541 nuclease (SNase domain protein).
       0.566
rplW
Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.
    
   0.534
ACZ07631.1
TIGRFAM: release factor H-coupled RctB family protein; PFAM: protein of unknown function UPF0027; KEGG: mxa:MXAN_1238 hypothetical protein.
  
   
 0.487
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.