STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08538.1KEGG: rme:Rmet_0895 putative signal peptide protein. (294 aa)    
Predicted Functional Partners:
ACZ08539.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gur:Gura_3543 binding-protein-dependent transport systems inner membrane component.
 
  
 0.992
ACZ08540.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VP0982 lipid transporter ATP- binding/permease protein.
 
  
 0.932
ACZ08535.1
KEGG: gsu:GSU0910 aldehyde:ferredoxin oxidoreductase, tungsten-containing; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase.
 
   
 0.883
ACZ08534.1
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.863
ACZ07980.1
KEGG: dde:Dde_2943 aldehyde:ferredoxin oxidoreductase, tungsten-containing, putative; PFAM: Aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase.
 
   
 0.794
ACZ08536.1
PFAM: thiamineS protein; KEGG: gme:Gmet_1044 thiamine S.
 
   
 0.755
ACZ08537.1
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gur:Gura_1193 UBA/ThiF-type NAD/FAD binding protein.
 
   
 0.732
ACZ07979.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2277 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
   
 0.720
ACZ08026.1
TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: xau:Xaut_3952 DNA binding domain-containing protein.
 
   
 0.714
ACZ08533.1
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.698
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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