STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08575.1PFAM: nitroreductase; KEGG: gbm:Gbem_0507 hypothetical protein. (218 aa)    
Predicted Functional Partners:
ACZ08809.1
PFAM: AMP-dependent synthetase and ligase; KEGG: bba:Bd3151 AMP-ligase.
   
 
 0.482
ACZ08576.1
PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: abb:ABBFA_003333 lysozyme M1 precursor(1,4- beta-N-acetylmuramidase M1).
       0.479
ACZ10269.1
PFAM: Abortive infection protein; KEGG: predicted protein; K07052.
  
  
 0.478
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
     
 0.475
ACZ07812.1
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: avi:Avi_5084 CMP/dCMP deaminase zinc-binding.
  
  
 0.474
ACZ08339.1
PFAM: ABC-2 type transporter; KEGG: pag:PLES_25922 inner membrane permease protein.
  
  
 0.472
ACZ08340.1
PFAM: ABC-2 type transporter; KEGG: pfl:PFL_2797 ABC transporter, ATP-binding protein/permease protein, putative.
  
  
 0.472
ACZ10683.1
PFAM: ABC-2 type transporter; KEGG: har:HEAR2357 ABC-type drug export system, membrane protein.
  
  
 0.472
ACZ10895.1
PFAM: ABC-2 type transporter; KEGG: pfl:PFL_2797 ABC transporter, ATP-binding protein/permease protein, putative.
  
  
 0.472
ACZ10896.1
PFAM: ABC-2 type transporter; KEGG: pag:PLES_25922 inner membrane permease protein.
  
  
 0.472
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.