Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACZ08615.1Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rhi:NGR_c08790 transcriptional regulator, AraC family. (278 aa)    
Predicted Functional Partners:
ACZ08616.1
PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: dds:Ddes_0873 protein of unknown function DUF6 transmembrane.
 
  
 0.911
ACZ08220.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_1173 cupin 2 domain-containing protein.
  
     0.570
ACZ07375.1
PFAM: regulatory protein TetR; KEGG: gur:Gura_0986 TetR family transcriptional regulator.
  
   
 0.561
ACZ08614.1
PFAM: GCN5-related N-acetyltransferase; KEGG: lpc:LPC_2301 hypothetical protein.
       0.548
ACZ09967.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aci:ACIAD1838 AraC family transcriptional regulator.
  
     0.539
ACZ10680.1
Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vsa:VSAL_II0910 HTH-type transcription regulator, AraC-family.
 
   
 0.516
ACZ10398.1
Transcriptional regulator, AraC family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ara:Arad_3946 transcriptional regulator protein.
 
   
 0.494
ACZ06935.1
Transcriptional regulator, AraC family; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1303 hypothetical protein.
  
     0.489
ACZ08613.1
Hypothetical protein.
       0.484
ACZ10026.1
PFAM: regulatory protein TetR; KEGG: pha:PSHAa0651 transcriptional regulator.
  
   
 0.469
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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