STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08629.1DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; KEGG: rec:RHECIAT_PB0000014 putative N- glycosylase/DNA lyase protein, HhH-GPD family. (218 aa)    
Predicted Functional Partners:
ACZ07138.1
PFAM: protein of unknown function DUF490; KEGG: rsq:Rsph17025_2622 hypothetical protein.
  
     0.719
ACZ09902.1
Pseudouridylate synthase-like protein; KEGG: abu:Abu_2199 tRNA pseudouridine synthase A.
  
     0.714
ACZ10637.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.682
ACZ09928.1
Hypothetical protein.
  
     0.583
ACZ08909.1
KEGG: gsu:GSU0647 hypothetical protein.
  
     0.568
ACZ09171.1
PFAM: protein of unknown function DUF448; KEGG: gur:Gura_1900 hypothetical protein.
  
     0.561
ACZ08638.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein.
 
     0.551
ACZ08630.1
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; glutaredoxin 2; KEGG: cff:CFF8240_0295 thioredoxin; Belongs to the thioredoxin family.
       0.547
ACZ09128.1
SMART: Deoxyribonuclease I-like; KEGG: noc:Noc_A0008 endonuclease/exonuclease/phosphatase.
  
     0.538
ACZ10679.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 putative outer membrane autotransporter barrel domain protein.
  
     0.536
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.