STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08643.1Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: plu:plu2771 hypothetical protein. (209 aa)    
Predicted Functional Partners:
ACZ09171.1
PFAM: protein of unknown function DUF448; KEGG: gur:Gura_1900 hypothetical protein.
  
     0.720
ACZ07275.1
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cha:CHAB381_0246 membrane protein.
 
   
 0.708
ACZ10339.1
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cha:CHAB381_0246 membrane protein.
 
   
 0.701
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 
 0.688
ACZ07036.1
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: CBS domain containing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sat:SYN_00943 nitrogen regulatory IIA protein.
  
  
 0.679
ACZ10637.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
 
  
 0.675
ACZ07928.1
TIGRFAM: conserved repeat domain protein; KEGG: vha:VIBHAR_05162 hypothetical protein.
  
   
 0.669
ACZ07600.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 putative outer membrane autotransporter barrel domain protein.
  
  
 0.664
ACZ09902.1
Pseudouridylate synthase-like protein; KEGG: abu:Abu_2199 tRNA pseudouridine synthase A.
  
   
 0.661
ACZ10380.1
KEGG: har:HEAR3087 hypothetical protein.
  
    0.649
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.