STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08666.1KEGG: lpp:lpp2473 hypothetical protein. (219 aa)    
Predicted Functional Partners:
ACZ09019.1
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nme:NMB1280 very long chain acyl-CoA dehydrogenase-related protein.
 
 0.715
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.616
ACZ08470.1
PFAM: regulatory protein TetR; KEGG: dal:Dalk_2422 putative transcriptional regulator, TetR family.
 
   
 0.498
ACZ08665.1
PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: gbm:Gbem_1752 cell wall hydrolase/autolysin.
     
 0.492
ACZ08664.1
KEGG: esa:ESA_01679 hypothetical protein; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I.
     
 0.441
ACZ08655.1
PFAM: protein of unknown function DUF1113; KEGG: dde:Dde_0966 metal dependent phosphohydrolase.
 
     0.422
ACZ08662.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.410
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
  
 
 0.406
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.