STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08728.1TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_0167 amino acid ABC transporter permease. (239 aa)    
Predicted Functional Partners:
ACZ08727.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: ypb:YPTS_2643 glutamine ABC transporter periplasmic protein.
 0.999
ACZ08729.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO_1042 amino acid ABC transporter, ATP- binding protein.
 0.998
ACZ09305.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: cco:CCC13826_0413 homoserine kinase (HSK; HK).
 
 0.984
ACZ08972.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bbr:BB2797 putative amino acid ABC transporter solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.981
ACZ09159.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: cju:C8J_0701 CjaC.
 
 0.980
ACZ09306.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccv:CCV52592_0494 glutamate/aspartate ABC transporter, ATP-binding protein.
 
 0.919
ACZ09157.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dat:HRM2_23010 GlnQ5.
 
 0.918
ACZ08399.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asa:ASA_0602 ABC-type glutamine/glutamate transporter, ATP-binding protein.
 
 0.917
ACZ08974.1
PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: lip:LI0127 ABC-type polar amino acid transport system, ATPase component.
 
 0.915
ACZ08398.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ccv:CCV52592_0290 acriflavine resistance protein.
 
 0.840
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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