STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08775.1TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: sat:SYN_01009 calcium-transporting ATPase. (883 aa)    
Predicted Functional Partners:
ACZ08774.1
PFAM: regulatory protein TetR; KEGG: dat:HRM2_40370 HTH-type transcriptional regulator (MtrR family protein).
       0.773
ACZ08776.1
KEGG: gbm:Gbem_0693 hypothetical protein.
  
 
 0.557
ACZ07020.1
TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: har:HEAR0231 peptidase S8.
   
 
 0.503
ACZ07950.1
TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: har:HEAR0231 peptidase S8.
   
 
 0.503
ACZ09546.1
TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: har:HEAR0231 peptidase S8.
   
 
 0.503
ACZ09417.1
PFAM: MgtC/SapB transporter; KEGG: pau:PA14_61330 magnesium transporter, MgtC family.
  
 
 0.471
ACZ10936.1
PFAM: MgtC/SapB transporter; KEGG: bgl:bglu_2g21640 MgtC family membrane protein.
  
 
 0.471
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
 
 0.467
ACZ07170.1
KEGG: abu:Abu_0943 hypothetical protein.
   
  
 0.409
ACZ09430.1
KEGG: ent:Ent638_0053 filamentous haemagglutinin outer membrane protein.
   
  
 0.409
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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