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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08852.1KEGG: bpy:Bphyt_5572 hypothetical protein. (162 aa)    
Predicted Functional Partners:
ACZ09843.1
KEGG: bpy:Bphyt_5572 hypothetical protein.
 
     0.635
ACZ10627.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: gur:Gura_4370 cupin 2 domain-containing protein.
 
     0.488
ACZ10449.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_1933 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.441
ACZ10063.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: dal:Dalk_4415 carboxymuconolactone decarboxylase.
 
     0.407
ACZ08853.1
PFAM: transcription activator effector binding; KEGG: cbd:CBUD_A0019 DNA-binding protein.
       0.405
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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