STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08900.1PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein; KEGG: dol:Dole_2230 PASTA domain-containing protein. (330 aa)    
Predicted Functional Partners:
rsgA-2
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.869
ACZ08077.1
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
   
 
 0.816
ACZ08896.1
PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: nam:NAMH_0233 fibronectin/fibrinogen-binding protein.
 
     0.808
ACZ08897.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: vpa:VPA1286 putative transcriptional regulator.
     
 0.794
ACZ08898.1
Ribulose-phosphate 3-epimerase; KEGG: gme:Gmet_0067 ribulose-5-phosphate 3- epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'- phosphate decarboxylase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.784
ACZ08080.1
SMART: protein phosphatase 2C domain protein; KEGG: azo:azo3885 putative phosphoprotein phosphatase.
 
 
 0.689
ACZ08078.1
KEGG: sil:SPO1063 hypothetical protein.
   
 
 0.669
ACZ08079.1
SMART: protein phosphatase 2C domain protein; KEGG: rsq:Rsph17025_3425 hypothetical protein.
  
 
 0.648
ACZ09449.1
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: son:SO_3608 serine/threonine protein kinase.
 
 0.501
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
 
   
 0.499
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.