STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08922.1PFAM: TatD-related deoxyribonuclease; KEGG: apl:APL_0278 putative Mg-dependent deoxyribonuclease. (252 aa)    
Predicted Functional Partners:
ACZ08921.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_2445 ABC transporter ATP-binding protein.
       0.667
ACZ08920.1
PFAM: NMT1/THI5 like domain protein; KEGG: prw:PsycPRwf_1444 NMT1/THI5-like protein.
       0.616
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.591
ACZ08918.1
PFAM: protein of unknown function DUF77; KEGG: vfi:VF_1442 hypothetical protein.
       0.589
ACZ08919.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6798 ABC transporter, permease protein.
       0.584
ACZ09475.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: sde:Sde_0275 SPFH domain-containing protein/band 7 family protein.
  
   
 0.497
ACZ07051.1
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gsu:GSU3117 single-strand binding protein.
  
    0.401
ACZ07685.1
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pca:Pcar_0643 ssDNA-binding protein.
  
    0.401
ACZ09717.1
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pca:Pcar_0643 ssDNA-binding protein.
  
    0.401
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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