STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08976.1PFAM: protein of unknown function DUF583; KEGG: nam:NAMH_1534 hypothetical protein. (131 aa)    
Predicted Functional Partners:
ACZ08975.1
PFAM: Peptidase M23; KEGG: hac:Hac_0297 ToxR-activated gene.
 
   
 0.884
ACZ08973.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cti:RALTA_A2761 putative binding-protein- dependent transporter, inner membrane component.
       0.732
ACZ08974.1
PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: lip:LI0127 ABC-type polar amino acid transport system, ATPase component.
       0.732
ACZ08972.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bbr:BB2797 putative amino acid ABC transporter solute-binding protein; Belongs to the bacterial solute-binding protein 3 family.
     
 0.728
metN
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
       0.709
ACZ08978.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cff:CFF8240_0968 D-methionine transport system permease protein MetI.
       0.709
ACZ08979.1
PFAM: NLPA lipoprotein; KEGG: pag:PLES_59011 putative TonB-dependent receptor.
       0.690
ACZ07063.1
KEGG: gsu:GSU2079 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
 
   
 0.429
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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