STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ08985.1KEGG: pca:Pcar_1774 hypothetical protein. (432 aa)    
Predicted Functional Partners:
ACZ08986.1
PFAM: VacJ family lipoprotein; KEGG: psa:PST_1428 lipoprotein.
 
     0.861
ACZ10637.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
    0.714
ACZ09171.1
PFAM: protein of unknown function DUF448; KEGG: gur:Gura_1900 hypothetical protein.
  
     0.710
ACZ10679.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 putative outer membrane autotransporter barrel domain protein.
  
     0.703
ACZ08987.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein.
 
     0.699
ACZ10339.1
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cha:CHAB381_0246 membrane protein.
  
  
 0.677
ACZ07600.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 putative outer membrane autotransporter barrel domain protein.
  
   
 0.663
ACZ07275.1
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cha:CHAB381_0246 membrane protein.
  
  
 0.660
ACZ08691.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 putative outer membrane autotransporter barrel domain protein.
  
     0.650
ACZ08392.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: set:SEN3305 putative surface-exposed virulence protein BigA.
  
     0.623
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.