Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACZ08205.1 | ACZ08995.1 | Sterm_1340 | Sterm_2141 | PFAM: protein of unknown function DUF218; KEGG: set:SEN0100 probable secreted protein. | PFAM: protein of unknown function DUF218; KEGG: vpa:VPA1680 hypothetical protein. | 0.602 |
ACZ08993.1 | ACZ08994.1 | Sterm_2139 | Sterm_2140 | PTS system, cellobiose-specific IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | PFAM: protein of unknown function DUF871. | 0.802 |
ACZ08993.1 | ACZ08995.1 | Sterm_2139 | Sterm_2141 | PTS system, cellobiose-specific IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | PFAM: protein of unknown function DUF218; KEGG: vpa:VPA1680 hypothetical protein. | 0.519 |
ACZ08994.1 | ACZ08993.1 | Sterm_2140 | Sterm_2139 | PFAM: protein of unknown function DUF871. | PTS system, cellobiose-specific IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.802 |
ACZ08994.1 | ACZ08995.1 | Sterm_2140 | Sterm_2141 | PFAM: protein of unknown function DUF871. | PFAM: protein of unknown function DUF218; KEGG: vpa:VPA1680 hypothetical protein. | 0.732 |
ACZ08995.1 | ACZ08205.1 | Sterm_2141 | Sterm_1340 | PFAM: protein of unknown function DUF218; KEGG: vpa:VPA1680 hypothetical protein. | PFAM: protein of unknown function DUF218; KEGG: set:SEN0100 probable secreted protein. | 0.602 |
ACZ08995.1 | ACZ08993.1 | Sterm_2141 | Sterm_2139 | PFAM: protein of unknown function DUF218; KEGG: vpa:VPA1680 hypothetical protein. | PTS system, cellobiose-specific IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.519 |
ACZ08995.1 | ACZ08994.1 | Sterm_2141 | Sterm_2140 | PFAM: protein of unknown function DUF218; KEGG: vpa:VPA1680 hypothetical protein. | PFAM: protein of unknown function DUF871. | 0.732 |