STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09062.1KEGG: hypothetical protein. (123 aa)    
Predicted Functional Partners:
ACZ09063.1
Sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: ribose 5-phosphate isomerase B family protein; K01808 ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase.
       0.752
ACZ09064.1
PFAM: histidine triad (HIT) protein; KEGG: msu:MS0399 Hit protein.
       0.682
ACZ09065.1
PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bhe:BH00110 tRNA/rRNA methyltransferase.
       0.570
ACZ09060.1
PFAM: protein of unknown function UPF0126; KEGG: swd:Swoo_1214 hypothetical protein.
       0.505
ACZ09061.1
PFAM: Ppx/GppA phosphatase; KEGG: ppd:Ppro_1779 Ppx/GppA phosphatase.
       0.505
ACZ09066.1
KEGG: CCAAT-box DNA binding protein subunit B.
       0.449
ACZ09059.1
PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: abu:Abu_0181 DNA/RNA helicase.
       0.439
nfo
Apurinic endonuclease Apn1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
       0.415
ACZ09067.1
Hypothetical protein.
       0.411
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.