STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09093.1KEGG: pcr:Pcryo_0212 negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2. (281 aa)    
Predicted Functional Partners:
ACZ09094.1
KEGG: hypothetical protein.
       0.773
ACZ08421.1
PFAM: Barstar (barnase inhibitor); KEGG: plu:plu4062 hypothetical protein.
  
     0.719
ACZ09092.1
PFAM: aminotransferase class I and II; KEGG: ftn:FTN_0410 aspartate aminotransferase.
  
  
 0.567
ACZ09359.1
KEGG: atc:AGR_C_820 hypothetical protein.
 
   
 0.562
ACZ08420.1
PFAM: guanine-specific ribonuclease N1 and T1; KEGG: spe:Spro_4389 guanine-specific ribonuclease N1 and T1.
  
     0.554
ACZ09095.1
Hypothetical protein.
       0.440
ACZ09549.1
KEGG: vsp:VS_II0460 predicted membrane protein.
 
     0.439
ACZ10344.1
PFAM: Lipocalin family protein; Lipocalin-related protein and Bos/Can/Equ allergen; KEGG: tau:Tola_1068 lipocalin family protein; Belongs to the calycin superfamily. Lipocalin family.
  
   
 0.432
ACZ09096.1
Hypothetical protein.
       0.415
ACZ10542.1
PFAM: MltA-interacting MipA family protein; KEGG: tgr:Tgr7_2586 scaffolding protein for murein- synthesizing holoenzyme putative outermembrane protein.
  
     0.411
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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