STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09136.1KEGG: tgr:Tgr7_1112 hypothetical protein. (468 aa)    
Predicted Functional Partners:
ACZ09134.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: abu:Abu_1996 ABC transporter, permease protein.
  
    0.514
ACZ09133.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ara:Arad_9869 nitrate/sulfonate ABC transporter.
       0.497
ACZ09135.1
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: nis:NIS_1591 sulfonate/nitrate ABC transporter, substrate-binding protein.
       0.494
ACZ09132.1
PFAM: protein of unknown function DUF1294; KEGG: apa:APP7_1150 hypothetical protein.
 
     0.477
ACZ08446.1
PFAM: protein of unknown function DUF470; protein of unknown function DUF472; protein of unknown function DUF471; KEGG: dat:HRM2_12970 putative lysylphosphatidylglycerol synthetase (LPG synthetase) (multiple peptide resistance factor).
  
  
 0.455
ACZ08643.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; KEGG: plu:plu2771 hypothetical protein.
  
  
 0.439
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.