STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09146.1PFAM: Radical SAM domain protein; KEGG: dde:Dde_0047 elongator protein 3/MiaB/NifB. (298 aa)    
Predicted Functional Partners:
ACZ09147.1
PFAM: transcription activator effector binding; KEGG: hch:HCH_03043 hypothetical protein.
 
     0.783
ACZ09145.1
PFAM: methyladenine glycosylase; KEGG: vsa:VSAL_II0794 DNA-3-methyladenine glycosylase I.
       0.641
ACZ09150.1
PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: hch:HCH_00194 transcriptional regulator.
 
     0.572
ACZ09739.1
Transcriptional regulator, MerR family; PFAM: transcription activator effector binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: cvi:CV_4236 MerR family transcriptional regulator.
 
     0.528
ACZ09148.1
Hypothetical protein; KEGG: shw:Sputw3181_3567 MORN repeat-containing protein.
       0.470
ACZ09076.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_4700 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.457
ACZ07376.1
PFAM: alpha/beta hydrolase fold; KEGG: nmu:Nmul_A1582 alpha/beta hydrolase fold.
 
     0.448
ACZ07962.1
Formamidopyrimidine-DNA glycosylase-like protein; KEGG: lpp:lpp0616 formamidopyrimidine-DNA glycosylase; Belongs to the FPG family.
 
     0.434
ACZ10549.1
PFAM: GCN5-related N-acetyltransferase.
 
     0.433
ACZ10665.1
PFAM: protein of unknown function UPF0066; KEGG: mex:Mext_0709 hypothetical protein.
 
     0.421
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.