STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09147.1PFAM: transcription activator effector binding; KEGG: hch:HCH_03043 hypothetical protein. (155 aa)    
Predicted Functional Partners:
ACZ09146.1
PFAM: Radical SAM domain protein; KEGG: dde:Dde_0047 elongator protein 3/MiaB/NifB.
 
     0.783
ACZ09145.1
PFAM: methyladenine glycosylase; KEGG: vsa:VSAL_II0794 DNA-3-methyladenine glycosylase I.
       0.614
ACZ07378.1
Hypothetical protein.
  
     0.600
ACZ08700.1
KEGG: ecm:EcSMS35_4832 hypothetical protein.
  
    0.599
ACZ09230.1
Hypothetical protein.
  
     0.581
ACZ08580.1
KEGG: msl:Msil_2450 hypothetical protein.
  
     0.577
ACZ10165.1
Uncharacterized stress protein (general stress protein 26)-like protein; KEGG: gur:Gura_1554 pyridoxamine 5'-phosphate oxidase-related, FMN-binding.
  
     0.526
ACZ09150.1
PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: hch:HCH_00194 transcriptional regulator.
 
     0.488
ACZ09148.1
Hypothetical protein; KEGG: shw:Sputw3181_3567 MORN repeat-containing protein.
       0.487
ACZ08931.1
Hypothetical protein.
 
     0.467
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.