STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09190.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hpp:HPP12_1186 ABC transporter ATP-binding protein. (236 aa)    
Predicted Functional Partners:
ACZ09191.1
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: transcriptional regulator, gntR family protein.
 
  
 0.924
ACZ09555.1
PFAM: ABC transporter related; KEGG: cla:Cla_0918 ABC transporter, ATP-binding protein.
 
   
 0.694
ACZ10682.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cak:Caul_4410 ABC transporter related.
 
    
0.632
ACZ08076.1
PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: wbm:Wbm0785 DnaJ-like molecular chaperone.
 
 
 0.587
ACZ09189.1
Hypothetical protein.
       0.551
ACZ07120.1
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: atc:AGR_C_3190 ABC transporter (ATP-binding protein).
 
 0.530
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.521
ACZ09188.1
KEGG: rfr:Rfer_1769 hypothetical protein.
       0.518
ACZ08741.1
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: scl:sce5644 carbohydrate ABC transporter.
 
 0.516
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 
 0.492
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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