STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09216.1PFAM: inner-membrane translocator; KEGG: hap:HAPS_1139 ABC transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family. (365 aa)    
Predicted Functional Partners:
ACZ09217.1
PFAM: protein of unknown function DUF534; KEGG: vvu:VV1_2224 ABC-type uncharacterized transport system, periplasmic component.
  
 0.980
ACZ09215.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dps:DP3102 ABC transporter, ATP-binding protein.
 
    0.978
ACZ09218.1
PFAM: protein of unknown function DUF534; KEGG: bbk:BARBAKC583_0047 ABC transporter, periplasmic substrate-binding protein.
  
 0.978
ACZ09491.1
PFAM: protein of unknown function DUF534; KEGG: vcj:VCD_003240 ABC transporter substrate- binding protein.
  
 0.960
ACZ09219.1
PFAM: HutP family protein.
 
     0.582
ACZ09214.1
KEGG: swp:swp_4884 hypothetical protein swp_4884.
       0.558
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.419
ACZ07482.1
PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: glo:Glov_2315 PhoH family protein.
   
    0.400
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.