STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09284.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bba:Bd3388 branched-chain amino acid transport system. (252 aa)    
Predicted Functional Partners:
ACZ09282.1
PFAM: inner-membrane translocator; KEGG: gbm:Gbem_1943 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
ACZ09283.1
PFAM: inner-membrane translocator; KEGG: mxa:MXAN_6663 putative branched chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
ACZ09281.1
PFAM: Extracellular ligand-binding receptor; KEGG: bba:Bd3385 branched-chain amino acid ABC transporter, amino acid-binding protein.
 
 
 0.997
ACZ09285.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_4384 ABC transporter related.
 
 
0.991
ACZ10580.1
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; phosphopantetheine- binding; SMART: phospholipid/glycerol acyltransferase; KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase.
  
  
 0.470
ACZ08669.1
KpsF/GutQ family protein; KEGG: vco:VC0395_A2104 hypothetical protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein; Belongs to the SIS family. GutQ/KpsF subfamily.
  
    0.457
ACZ09237.1
PFAM: Helix-turn-helix type 11 domain protein; CBS domain containing protein; KEGG: hypothetical protein.
  
    0.457
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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